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mrna sequencing data for the ucec dataset from tcga (data version 2016-01-28)  (Broad Institute Inc)

 
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    Broad Institute Inc mrna sequencing data for the ucec dataset from tcga (data version 2016-01-28)
    Mrna Sequencing Data For The Ucec Dataset From Tcga (Data Version 2016 01 28), supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/tcga+data+version+2016_01_28/mrna+sequencing+data+for+the+ucec+dataset+from+tcga++data+version+2016+01+28+/pmc07563948-199-8-16
    Average 90 stars, based on 1 article reviews
    mrna sequencing data for the ucec dataset from tcga (data version 2016-01-28) - by Bioz Stars, 2026-11
    90/100 stars

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    other:

    Article Title: Prognostic role of TSPAN1, KIAA1324 and ESRP1 in prostate cancer
    Article Snippet: TCGA normalized mRNA expression data (Illumina HiSeq 2000 RNA Sequencing platform, version 2, data version 28.01.2016) and clinical data were extracted for 497 patients in a prostatectomy cohort with the full spectrum of stages and grades.

    Article Title: SIRIUS, Ultra-Scintillating Upconversion Breast Implant for Remote Orthotopic Photodynamic Therapy.
    Article Snippet: Present day strategies for delivery of wireless photodynamic therapy (PDT) to deep-seated targets are limited by the inadequacy of irradiance and insufficient therapeutic depth.. Here we report the design and preclinical validation of a flexible wireless upconversion nanoparticle (UCNP) implant (SIRIUS) that is capable of large field, high intensity illumination for PDT of deep-seated tumors.. The implant achieves this by incorporating submicrometer core−shell−shell NaYF4 UCNPs into its design, which significantly enhances upconversion efficiency and mitigates light loss from surface quenching.

    Article Title: Detecting Liver Cancer Using Cell-Free DNA Fragmentomes
    Article Snippet: Segmented copy-number data, determined by analysis of the Affymetrix genome-wide human SNP array 6.0, were retrieved from the Broad Institute TCGA Genome Data Analysis Center (2016-01-28 release date, using RTCGA package, version 1.16.0).

    Article Title: Somatic mutation subtypes of lung adenocarcinoma in East Asian reveal divergent biological characteristics and therapeutic vulnerabilities
    Article Snippet: The somatic mutation features of a TCGA LUAD cohort ( n = 574, TCGA data version 2016_01_28) were obtained from the Broad Institute FireBrowse Data Portal via RESTful API interfaces ( http://firebrowse.org/ ).

    Article Title: Antibody targeting of B7-H4 enhances the immune response in urothelial carcinoma
    Article Snippet: Clinical, mRNA seq, and mutation data from The Cancer Genome Atlas (TCGA) bladder urothelial carcinoma dataset was downloaded from the Broad Institute Genome Data Analysis Center (GDAC) using TCGA data version 2016_01_28 (http:// gdac.broadinstitute.org).27,28 Analysis was performed with R v3.5.1 utilizing Bioconductor v3.9.

    Article Title: DNA polymerase η mutational signatures are found in a variety of different types of cancer
    Article Snippet: Expression analysis of the POLH gene For the POLH gene expression analysis, the normalized version of the RSEM (Broad Institute TCGA Genome Data Analysis Center, 2016, Analysis-ready standardized TCGA data from Broad GDAC Firehose 2016_01_28 run.

    Sequencing:

    Article Title: Targeting Dopamine Receptor D2 by Imipridone Suppresses Uterine Serous Cancer Malignant Phenotype
    Article Snippet: .. mRNA sequencing data for the UCEC dataset from TCGA (data version 2016-01-28) was downloaded from the Broad Institute TCGA Genome Data Analysis Center ( http://firebrowse.org/ ). ..

    Gene Expression:

    Article Title: Cytoskeletal Dynamics in Epithelial-Mesenchymal Transition: Insights into Therapeutic Targets for Cancer Metastasis.
    Article Snippet: The data shows about 65% of cytoskeleton genes are positively correlated with EMT. .. TPM1 −0.129 3.78E−47 Gene expression (FPKM) data from TCGA cohorts were downloaded from Broad firehose, version 2016_01_28 (Reference: Broad Institute TCGA Genome Data Analysis Center (2016): Firehose stddata__2016_01_28 run. .. Broad Institute of MIT and Harvard. doi:10.7908/C11G0KM9).



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    Broad Institute Inc mrna sequencing data for the ucec dataset from tcga (data version 2016-01-28)
    Mrna Sequencing Data For The Ucec Dataset From Tcga (Data Version 2016 01 28), supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/tcga+data+version+2016_01_28/mrna+sequencing+data+for+the+ucec+dataset+from+tcga++data+version+2016+01+28+/pmc07563948-199-8-16
    Average 90 stars, based on 1 article reviews
    mrna sequencing data for the ucec dataset from tcga (data version 2016-01-28) - by Bioz Stars, 2026-11
    90/100 stars
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